Bioinformatics core
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Genomics Analysis Service Items: 1. SNP analysis and profiling 2. Genome-wide association study (GWAS) 3. De-novo genome annotation 4. Epigenetics analysis 5. Metagenomics analysis 6. Pharmacogenomics analysis |
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Transcriptomics Analysis Service Items: 1. mRNA/small RNA/micro RNA differential expression 2. mRNA alternative splicing 3. De-novo RNA sequencing analysis 4. Gene set enrichment analysis (GSEA) |
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Proteomics Analysis Service Items: 1. Protein structure and post-translational modification 2. De-novo protein sequencing analysis 3. Protein-DNA/RNA/protein interaction |
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Systems Biology Analysis Service Items: 1. Pathway reconstruction (from experimental data) 2. Pathway network analysis 3. Pathway perturbation analysis (under SNPs/drugs/ environmental factors) |
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Advisory Committee
Li, Yu-Chuan
Professor, Graduate Institute of Biomedical Informatics
Hsu, Chien-Yeh
Professor, Graduate Institute of Biomedical Informatics
Liu, Chien-Tsai
Professor, Graduate Institute of Biomedical Informatics
Service Faculty Team
Lee, Yuan-Chii
Associate Professor, Graduate Institute of Biomedical Informatics
•Research Fields: Cancer genomics, Research of cancer metastatic mechanisms, Neuro disease genomics
•Expertise:
- Microarray data analysis
- Next Generation Sequencing data analysis
- Gene enrichment functional annotation
Chang, Wei-Chiao
Associate Professor, Master Program for Clinical Pharmacogenomics and Pharmacoproteomics
•Research Fields: Pharmacogenomics, Disease-gene association study, Single-cell calcium ion image analysis
•Expertise:
- Discovery for rare variants, SNP, somatic mutations (by exome sequencing)
- Functional analysis for disease/drug and genomics association
- Detection of real-time single cell calcium mobilization
Wang, Wen-Chang
Assistant Professor, Ph.D. Program for Translational Medicine
•Research Fields: Genetic epidemiology, Genetic statistics
•Expertise:
- Genetic linkage analysis
- Genetic association analysis
- High-throughput genomic data analysis
- False discovery rate (FDR) analysis
- Biostatistics
Chang, Yo-Cheng (core manager)
Assistant Professor, Graduate Institute of Biomedical Informatics
•Research Fields: Systems biology, Pathway analysis, Genome sequencing and annotation, Integrative omics data analysis
•Expertise:
- Mining potential biomarkers and drug targets through systems biology approach
- Next-generation sequencing and microarray data analysis
- Signaling / Regulatory / Metabolic pathway reconstruction and network analysis
- Pathway perturbation analysis under SNPs / drugs / environmental factors
Chang, Tzu-Hao (core manager)
Assistant Professor, Graduate Institute of Biomedical Informatics
•Research Fields: Regulatory RNAs, Protein post-translational modifications, Epigenetics, Metagenomics
•Expertise:
- Integrative analysis for microarray and next-generation sequencing data in various biological applications
- Cooperation in Interdisciplinary biological research
- Identification of novel biomarkers for diagnosis and prognosis
- Development of biological tools and databases
Huang, Tsui-Chin
Assistant Professor, Ph.D. Program for Cancer Biology and Drug Discovery
•Research Fields: Exploring cancer progression and anti-cancer drug mechanisms using systems biology approach
•Expertise:
- Systems biology
- Proteomics
- Cancer biology
- Signaling pathway analysis
Su, Chia-Yu
Assistant Professor, Graduate Institute of Biomedical Informatics
•Research Fields: Computational biology, Proteomics, Protein structure and function prediction analysis, Data mining
•Expertise:
- Computational biology
- Proteomics
- Protein structure and function prediction analysis
- Data mining
Contact
Please email to core manager: bioinfo@tmu.edu.tw. We will reply as soon as possible.
